Index A | C | F | M | P | R A align_complex_to_protein_only() (in module posebench.analysis.complex_alignment) align_to_binding_site() (in module posebench.analysis.complex_alignment) C calculate_rmsd() (in module posebench.utils.model_utils) F find_ligand_files() (in module posebench.utils.utils) find_protein_files() (in module posebench.utils.utils) M main() (in module posebench.analysis.complex_alignment) (in module posebench.models.inference_relaxation) module posebench.__init__ posebench.analysis.complex_alignment posebench.models.inference_relaxation posebench.utils.model_utils posebench.utils.utils P posebench.__init__ module posebench.analysis.complex_alignment module posebench.models.inference_relaxation module posebench.utils.model_utils module posebench.utils.utils module R register_custom_omegaconf_resolvers() (in module posebench.__init__) relax_inference_results() (in module posebench.models.inference_relaxation) relax_single_filepair() (in module posebench.models.inference_relaxation) resolve_method_input_csv_path() (in module posebench.__init__) resolve_method_ligand_dir() (in module posebench.__init__) resolve_method_output_dir() (in module posebench.__init__) resolve_method_protein_dir() (in module posebench.__init__) resolve_method_title() (in module posebench.__init__) resolve_omegaconf_variable() (in module posebench.__init__) run_command_with_timeout() (in module posebench.utils.utils)